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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7021576 chr9:100540541 C/T CLDN2 chrX:106143394-106174091:+ 0.27 6.11 2.11E-9 Box Plot
THCA rs7021576 chr9:100540541 C/T EML5 chr14:89078775-89259096:- 0.3 6.77 3.71E-11 Box Plot
THCA rs7021576 chr9:100540541 C/T EPDR1 chr7:37723446-37991543:+ 0.32 7.06 5.96E-12 Box Plot
THCA rs7021576 chr9:100540541 C/T GGT5 chr22:24615622-24641110:- 0.26 6.04 3.1E-9 Box Plot
THCA rs7021576 chr9:100540541 C/T LRRC42 chr1:54411750-54433841:+ -0.24 -6.3 6.58E-10 Box Plot
THCA rs7021576 chr9:100540541 C/T NKX6-1 chr4:85413140-85419603:- 0.5 8.65 7.61E-17 Box Plot
THCA rs7021576 chr9:100540541 C/T PLCE1 chr10:95790569-96092580:+ 0.28 6.39 3.94E-10 Box Plot
THCA rs7022148 chr9:100660824 T/C FAM81A chr15:59664892-59815748:+ -0.25 -6.01 3.68E-9 Box Plot
THCA rs7025173 chr9:141066287 G/C TUBB4Q chr4:190903679-190906024:- -0.82 -15.22 6.38E-43 Box Plot
THCA rs7027030 chr9:100550455 A/C BMPR1A chr10:88516358-88692595:+ -0.24 -6.27 8.15E-10 Box Plot
THCA rs7027030 chr9:100550455 A/C CLDN2 chrX:106143394-106174091:+ 0.26 6.07 2.61E-9 Box Plot
THCA rs7027030 chr9:100550455 A/C EML5 chr14:89078775-89259096:- 0.3 6.96 1.12E-11 Box Plot
THCA rs7027030 chr9:100550455 A/C EPDR1 chr7:37723446-37991543:+ 0.33 7.31 1.1E-12 Box Plot
THCA rs7027030 chr9:100550455 A/C GGT5 chr22:24615622-24641110:- 0.26 6.06 2.78E-9 Box Plot
THCA rs7027030 chr9:100550455 A/C LRRC42 chr1:54411750-54433841:+ -0.23 -5.95 5.14E-9 Box Plot